apollo.dataadapter.das
Interface DASSequence

All Known Implementing Classes:

SimpleDASSequence

public interface DASSequence

I represent the data contained in a dna sequence (as defined by the DAS-spec) needed by Apollo to display a sequence. I have a reference implementation in the simple sub-package

See Also:

SimpleDASSequence

Method Summary

java.lang.String	getDNA()
java.lang.String	getDNALength()
java.lang.String	getId()
java.lang.String	getStart()
java.lang.String	getStop()
java.lang.String	getVersion()
void	setDNA(java.lang.String newValue)
void	setDNALength(java.lang.String newValue)
void	setId(java.lang.String newValue)
void	setStart(java.lang.String newValue)
void	setStop(java.lang.String newValue)
void	setVersion(java.lang.String newValue)

Method Detail

getId

java.lang.String getId()

getStart

java.lang.String getStart()

getStop

java.lang.String getStop()

getVersion

java.lang.String getVersion()

getDNALength

java.lang.String getDNALength()

getDNA

java.lang.String getDNA()

setId

void setId(java.lang.String newValue)

setStart

void setStart(java.lang.String newValue)

setStop

void setStop(java.lang.String newValue)

setVersion

void setVersion(java.lang.String newValue)

setDNALength

void setDNALength(java.lang.String newValue)

setDNA

void setDNA(java.lang.String newValue)