apollo.datamodel
Class Chromosome

java.lang.Object
  apollo.datamodel.Chromosome

public class Chromosome
extends java.lang.Object

Constructor Summary

Chromosome(java.lang.String species_name, java.lang.String id, int length)

Chromosome(java.lang.String species_name, java.lang.String id, int plength, int centrolength, int qlength)

Chromosome(java.lang.String species_name, java.lang.String id, java.util.Vector bands)

Method Summary

java.util.Vector	getBands()
int	getCentroLength()
java.lang.String	getCoordSystem()
java.lang.String	getDisplayId()
int	getLength()
int	getPlength()
int	getQlength()
java.lang.String	getSpeciesName()
void	setCentroLength(int length)
void	setCoordSystem(java.lang.String coordSys)
void	setLength(int length)
void	setPLength(int length)
void	setQLength(int length)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Chromosome

public Chromosome(java.lang.String species_name,
                  java.lang.String id,
                  java.util.Vector bands)

Chromosome

public Chromosome(java.lang.String species_name,
                  java.lang.String id,
                  int length)

Chromosome

public Chromosome(java.lang.String species_name,
                  java.lang.String id,
                  int plength,
                  int centrolength,
                  int qlength)

Method Detail

getSpeciesName

public java.lang.String getSpeciesName()

getDisplayId

public java.lang.String getDisplayId()

getLength

public int getLength()

getPlength

public int getPlength()

getQlength

public int getQlength()

getCentroLength

public int getCentroLength()

getBands

public java.util.Vector getBands()

setLength

public void setLength(int length)

setPLength

public void setPLength(int length)

setQLength

public void setQLength(int length)

setCentroLength

public void setCentroLength(int length)

setCoordSystem

public void setCoordSystem(java.lang.String coordSys)

getCoordSystem

public java.lang.String getCoordSystem()