apollo.gui.drawable
Class DrawablePhaseHighlightNoHatGeneFeatureSet

java.lang.Object
  apollo.gui.drawable.DrawableSeqFeature
      apollo.gui.drawable.DrawableFeatureSet
          apollo.gui.drawable.DrawableGeneFeatureSet
              apollo.gui.drawable.DrawablePhaseHighlightGeneFeatureSet
                  apollo.gui.drawable.DrawablePhaseHighlightNoHatGeneFeatureSet

All Implemented Interfaces:

Drawable, DrawableSetI, SelectableI

public class DrawablePhaseHighlightNoHatGeneFeatureSet
extends DrawablePhaseHighlightGeneFeatureSet
implements DrawableSetI

Field Summary

Fields inherited from class apollo.gui.drawable.DrawableFeatureSet

logger

Fields inherited from class apollo.gui.drawable.DrawableSeqFeature

boxBounds, DECORATED, draw_level, drawable_parent, feature, flags, HIGHLIGHTED, is_drawn, LABELED, LEFTEDGE, RIGHTEDGE, SELECTED, VISIBLE

Constructor Summary

DrawablePhaseHighlightNoHatGeneFeatureSet()

Method Summary

void	drawUnselected(java.awt.Graphics g, java.awt.Rectangle boxBounds, Transformer transformer, TierManagerI manager) Draws arced intron line

Methods inherited from class apollo.gui.drawable.DrawablePhaseHighlightGeneFeatureSet

createDrawable, setHighlights, setSelected

Methods inherited from class apollo.gui.drawable.DrawableGeneFeatureSet

addFeatureDrawable

Methods inherited from class apollo.gui.drawable.DrawableFeatureSet

addDrawable, addHighlights, deleteDrawable, draw, draw, drawDashedLines, drawSelected, findDrawable, findFeaturesByAllNames, findFeaturesByAllNames, getDrawableAt, getDrawables, getFeatureSet, initSet, repairFeatureSet, repairFeatureSet, setEdgeHighlights, setFeature, setHighlighted, setLabeled, setTierIndex, setVisible, size, sort, toString_mv

Methods inherited from class apollo.gui.drawable.DrawableSeqFeature

accept, addDecorations, contains, drawMissing, drawStartAndStopCodons, feature_draw, fontColorForBackground, getBoxBounds, getCharY, getCodonX, getDisplayLabel, getDrawableColor, getDrawLevel, getEnd, getFeature, getFeatureProperty, getFeatureType, getHigh, getLeft, getLeftmostVisible, getLow, getName, getRefDrawable, getRight, getSize, getStart, getStrand, getTierIndex, getType, getYCentre, getYSpace, intersects, isDecorated, isDrawn, isForwardStrand, isHighlighted, isLabeled, isLeftEdge, isRightEdge, isSelected, isVisible, sameFeature, setBoxBounds, setDrawLevel, setDrawn, setLabeled, setRefDrawable, synchFeatureProperty, wantToDraw

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface apollo.gui.drawable.DrawableSetI

addDrawable, addFeatureDrawable, deleteDrawable, getDrawableAt, getDrawables, getFeatureSet, repairFeatureSet, size

Methods inherited from interface apollo.gui.drawable.Drawable

draw, draw, findDrawable, getBoxBounds, getDisplayLabel, getDrawLevel, getEnd, getFeature, getFeatureProperty, getHigh, getLeft, getLow, getName, getRefDrawable, getRight, getSize, getStart, getStrand, getTierIndex, getType, intersects, isDecorated, isDrawn, isVisible, setBoxBounds, setDrawLevel, setDrawn, setEdgeHighlights, setFeature, setHighlighted, setRefDrawable, setTierIndex, setVisible, synchFeatureProperty

Methods inherited from interface apollo.gui.SelectableI

isSelected, setSelected

Constructor Detail

DrawablePhaseHighlightNoHatGeneFeatureSet

public DrawablePhaseHighlightNoHatGeneFeatureSet()

Method Detail

drawUnselected

public void drawUnselected(java.awt.Graphics g,
                           java.awt.Rectangle boxBounds,
                           Transformer transformer,
                           TierManagerI manager)

Description copied from class: DrawableGeneFeatureSet

Draws arced intron line

Overrides:

drawUnselected in class DrawableGeneFeatureSet